Predicting Protein Subcellular Localization

Terms of Service

    Imprint (Impressum)

    GDPR Declaration (Datenschutzerklaerung)



Contact

    Please write an eMail to SherLoc2 Admin



How to Cite

    Briesemeister, S.; Blum, T.; Brady, S.; Lam, Y.; Kohlbacher, O. and Shatkay, H. (2009).

    SherLoc2: a high-accuracy hybrid method for predicting subcellular localization of proteins.

    J. Proteome Res., 8(11):5363-5366


    Supplementary Material: SherLoc2 Supplementary Material



License

    SherLoc2 is distributed under the GNU General Public License (GPL).

    SherLoc2 is using LIBSVM, BLAST, and InterProScan. These software tools have their own license terms.



Third Party Software Tools

    SherLoc2 is implemented in Python 2.7 and uses LIBSVM, BLAST, and optionally InterProScan.

    LIBSVM Version Info:

        Version: 3.12-1

    BLAST Version Info:

        blastp: 2.2.28+

        Package: blast 2.2.28, build Jun 3 2013 11:17:14

    InterProScan Version Info:

        InterProScan version 5.29-68.0

        InterProScan 64-Bit build (requires Java 1.8)



Data Sets

    SherLoc2 is a hybrid subcellular localization predictor that combines sequence-based predictions of MultiLoc2 and text-based predictions of EpiLoc.




    Mail to SherLoc2 Admin

    Imprint (Impressum)

    GDPR Declaration (Datenschutzerklaerung)